Part of the Genetics and Genomics Commons

Works in Genetics and Genomics

2023

Transcriptional Pausing Factor m1bp Regulates Cellular Homeostasis by Suppressing Autophagy and Apoptosis in Drosophila Eye, Anuradha Venkatakrishnan Chimata, Hannah Darnell, Akanksha Raj, Madhuri Kango-Singh
Biology Faculty Publications

PDF

N-Acetyltransferase 9 ameliorates Aβ42-mediated neurodegeneration in the Drosophila eye, Prajakta Deshpande, Anuradha Venkatakrishnan Chimata, Emily E. Snider, Aditi Singh, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

Surveillance and Stewardship: Where Infection Prevention and Antimicrobial Stewardship Intersect, Fred C. Tenover, Debra A. Goff
Biology Faculty Publications

PDF

Directed Carbapenemase Testing Is No Longer Just for Enterobacterales: Cost, Labor, and Workflow Assessment of Expanding Carbapenemase Testing to Carbapenem-Resistant P. aeruginosa, Fred C. Tenover, Christian M. Gill, Poonam Rajkotia, Amity L. Roberts, David P. Nicolau
Biology Faculty Publications

PDF

SARS-CoV2 Nsp3 protein triggers cell death and exacerbates Aβ42-mediated neurodegeneration, Aditi Singh, Anuradha Venkatakrishnan Chimata, Prajakta Deshpande, A. Sangeeth, S. Bajpai, M. Rajput, Amit Singh
Biology Faculty Publications

2022

A Pooling Strategy for Detecting Carbapenem Resistance Genes by the Xpert Carba-R Test in Rectal Swab Specimens, Fred C. Tenover, Peng Zhang, Qi Wang, Chaoe Zhou, Feifei Zhang, Xinghui Gao, Yi-Wei Tang, Hui Wang
Biology Faculty Publications

PDF

Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana (Roseaceae) and potential native competitors, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. McEwan
Biology Faculty Publications

PDF

Mechanisms of Carbapenemase-Mediated Resistance among High-Risk Pseudomonas aeruginosa Lineages in Peru, Isabella A. Tickler, Juan Carlos Gomez De La Torre, Luis Alvarado, Anne E. Obradovich, Fred C. Tenover
Biology Faculty Publications

PDF

Characterization of SCCmec Instability in Methicillin-Resistant Staphylococcus aureus Affecting Adjacent Chromosomal Regions, Including the Gene for Staphylococcal Protein A (spa), Isabella A. Tickler, Fred C. Tenover, C. R. Scharn, R. V. Goering
Biology Faculty Publications

PDF

Detection of Methicillin-Resistant Staphylococcus aureus Infections Using Molecular Methods, Fred C. Tenover, Isabella A. Tickler
Biology Faculty Publications

PDF

Carbapenemase-Producing Pseudomonas aeruginosa – an Emerging Challenge, Fred C. Tenover, David P. Nicolau, Christian M. Gill
Biology Faculty Publications

PDF

Clinical Performance of the Xpert® CT/NG Test for Detection of Chlamydia trachomatis and Neisseria gonorrhoeae: A Multicenter Evaluation in Chinese Urban Hospitals, Fred C. Tenover, Yan Han, Mei-Qin Shi, Qing-Ping Jiang, Wen-Jing Le, Xiao-Lin Qin, Han-Zhen Xiong, He-Ping Zheng, Yi-Wei Tang, Yue-Ping Yin
Biology Faculty Publications

PDF

2021

Phenotypic/Genotypic Profile of Oxa-10-like-Harboring, Carbapenem-Resistant Pseudomonas aeruginosa: Using Validated Pharmacokinetic/Pharmacodynamic in Vivo Models to Further Evaluate Enzyme Functionality and Clinical Implications, Fred C. Tenover, Christian M. Gill, Adrian Brink, Chun Yat Chu, Jennifer Coetzee, George Dimopoulos, Clinton Moodley, Christoffel Johannes Opperman, Spyros Pournaras, Isabella A. Tickler, Hafsah Deepa Tootla, Sophia Vourli, David P. Nicolau
Biology Faculty Publications

PDF

Using Molecular Diagnostics to Develop Therapeutic Strategies for Carbapenem-Resistant Gram-Negative Infections, Fred C. Tenover
Biology Faculty Publications

PDF

Unbiased automated quantitation of ROS signals in live retinal neurons of Drosophila using Fiji/ImageJ, Prajakta Deshpande, Neha Gogia, Anuradha Venkatakrishnan Chimata, Amit Singh
Biology Faculty Publications

PDF

Unbiased automated quantitation of ROS signals in live retinal neurons of Drosophila using Fiji/ImageJ, Prajakta Deshpande, Neha Gogia, Anuradha Venkatakrishnan Chimata, Amit Singh
Amit Singh

Assessing the influence of riparian invasion by the shrub Lonicera maackii on terrestrial subsidies to headwater streams, Erin C. Rowekamp, Julia I. Chapman, Ryan McEwan
Ryan McEwan

Assessing Seed Handling Processes to Facilitate a Community-Engaged Approach to Regional Forest Restoration, Meredith Cobb, Michaela J. Woods, Ryan McEwan
Ryan McEwan

Parallel Validation of the Ng-Test Carba 5 and the Xpert Carba-R for Detection and Characterization of Carbapenem-Resistant Enterobacterales Causing Bloodstream Infections, Fred C. Tenover, Zeshi Liu, Lu Bai, Jiayun Liu, Jing Lei, Xinghui Gao, Ke Lei, Yi-Wei Tang, Yan Geng, Aili He
Biology Faculty Publications

Hippo signaling: bridging the gap between cancer and neurodegenerative disorders, Neha Gogia, Anuradha Venkatakrishnan Chimata, Prajakta Deshpande, Aditi Singh, Amit Singh
Biology Faculty Publications

Characterization of Carbapenem-Resistant Gram-Negative Bacterial Isolates from Nigeria by Whole Genome Sequencing, Isabella A. Tickler BS, Fred C. Tenover PhD, Caitlin M. dela Cruz BS, Shuwaram A. Shettima MBBS, Victoria M. Le BS, Scott Dewell PhD, Jack Sumner BS
Biology Faculty Publications

Molecular Detection of Carbapenem Resistance Genes in Rectal Swabs from Patients in Gulf Cooperation Council Hospitals, Fred C. Tenover, Manaf AlQahtani, Isabella A. Tickler, Z. Al Deesi, W. AlFouzan, A. Al Jabri, R. Al Jindan, S. Al Johani, S. A. Alkahtani, A. Al Kharusi, E. Mokaddas, A. Nabi, N. Saeed, A. Madian, J. Whitmore
Biology Faculty Publications

Viropana (vna) 4, Abijeet Singh Mehta, Panagiotis A. Tsonis, Amit Singh
Components of a Regeneration Toolkit: Notophthalmus viridescens

Viropana (vna) 3, Abijeet Singh Mehta, Panagiotis A. Tsonis, Amit Singh
Components of a Regeneration Toolkit: Notophthalmus viridescens

Viropana (vna) 5, Abijeet Singh Mehta, Panagiotis A. Tsonis, Amit Singh
Components of a Regeneration Toolkit: Notophthalmus viridescens

Viropana (vna) 2, Abijeet Singh Mehta, Panagiotis A. Tsonis, Amit Singh
Components of a Regeneration Toolkit: Notophthalmus viridescens

Viropana (vna) 1, Abijeet Singh Mehta, Panagiotis A. Tsonis, Amit Singh
Components of a Regeneration Toolkit: Notophthalmus viridescens

2020

Mobile genetic elements responsible for discordant Staphylococcus aureus phenotypes and genotypes in the same blood culture bottle, Isabella A. Tickler, Richard V. Goering, Scott Dewell, Victoria M. Le, Leepakshi Johar, Anne E. Obradovich, Fred C. Tenover
Biology Faculty Publications

Evaluation of the Xpert Carba-R Nxg Assay for Detection of Carbapenemase Genes in a Global Challenge Set of Pseudomonas aeruginosa Isolates, Fred C. Tenover, Christian M. Gill, Tomefa E. Asempa, Isabella A. Tickler, Caitlin M. dela Cruz, David P. Nicolau
Biology Faculty Publications

PDF

Herb-Layer Dynamics in an Old-Growth Forest: Vegetation–Environment Relationships and Response to Invasion-Related Perturbations, Taylor M. Buskey, Margaret E. Maloney, Julia I. Chapman, Ryan W. McEwan
Biology Faculty Publications

PDF

Multicenter Evaluation of Xpert Carba-R Assay for Detection and Identification of the Carbapenemase Genes in Rectal Swabs and Clinical Isolates, Fred C. Tenover, Xi Jin, Haomin Zhang, Shi Wu, Xiaohua Qin, Peiyao Jia, Yi-Wei Tang, Min Li, Fupin Hu, Qiwen Yang, Yunsong Yu
Biology Faculty Publications

An E3 ubiquitin ligase, cullin‐4 regulates retinal differentiation in Drosophila eye, Meghana Tare, Anuradha Chimata Venkatakrishnan, Neha Gogia, Sonia Narwal, Prajakta Deshpande, Amit Singh
Amit Singh

A Positive Feedback Loop of Hippo- and c-Jun-Amino-Terminal Kinase Signaling Pathways Regulates Amyloid-Beta-Mediated Neurodegeneration, Madison Irwin, Meghana Tare, Aditi Singh, Oorvashi Roy Puli, Neha Gogia, Matthew Riccetti, Prajakta Deshpande, Madhuri Kango-Singh, Amit Singh
Amit Singh

Hippo signaling: bridging the gap between cancer and neurodegenerative disorders, Neha Gogia, Anuradha Chimata Venkatakrishnan, Prajakta Deshpande, Aditi Singh, Amit Singh
Amit Singh

An undergraduate cell biology laboratory exercise of Nile Red staining to mark lipid droplets in fly eye model of neurodegeneration, Prajakta Deshpande, Anuradha Chimata Venkatakrishnan, Amit Singh
Amit Singh

Inactivation of Hippo and cJun-N-terminal Kinase (JNK) signaling mitigate FUS mediated neurodegeneration in-vivo, Ankita Sarkar, Abijeet Singh Mehta, Prajakta Deshpande, Madhuri Kango-Singh, Udai Bhan Pandey, Amit Singh
Amit Singh

Presence of Clostridioides difficile and multidrug-resistant healthcare-associated pathogens in stool specimens from hospitalized patients in the USA, Isabella A. Tickler, Caitlin M. dela Cruz, Anne E. Obradovich, Richard V. Goering, Scott Dewell, Victoria M. Le, Fred C. Tenover, Healthcare Associated Infections Consortium
Biology Faculty Publications

The influence of riparian invasion by the terrestrial shrub Lonicera maackii on aquatic macroinvertebrates in temperate forest headwater streams, Michelle N. Little, Kevin W. Custer, Eric B. Borth, Julia I. Chapman, Mitchell J. Kukla, Corey Kuminecz, Margaret E. Maloney, Michaela J. Woods, Ryan McEwan
Biology Faculty Publications

PDF

An E3 ubiquitin ligase, cullin‐4 regulates retinal differentiation in Drosophila eye, Meghana Tare, Anuradha Venkatakrishnan Chimata, Neha Gogia, Sonia Narwal, Prajakta Deshpande, Amit Singh
Biology Faculty Publications

Does the Presence of Multiple β-Lactamases in Gram-Negative Bacilli Impact the Results of Antimicrobial Susceptibility Tests and Extended-Spectrum β-Lactamase and Carbapenemase Confirmation Methods?, Fred C. Tenover, Caitlin M. dela Cruz, Scott Dewell, Victoria M. Le, Isabella A. Tickler
Biology Faculty Publications

PDF

Inactivation of Hippo and cJun-N-terminal Kinase (JNK) signaling mitigate FUS mediated neurodegeneration in-vivo, Ankita Sarkar, Abijeet Singh Mehta, Prajakta Deshpande, Madhuri Kango-Singh, Udai Bhan Pandey, Amit Singh
Biology Faculty Publications

PDF

Assessing the influence of riparian invasion by the shrub Lonicera maackii on terrestrial subsidies to headwater streams, Erin C. Rowekamp, Julia I. Chapman, Ryan McEwan
Biology Faculty Publications

PDF

Assessing Seed Handling Processes to Facilitate a Community-Engaged Approach to Regional Forest Restoration, Meredith Cobb, Michaela J. Woods, Ryan McEwan
Biology Faculty Publications

PDF

A Positive Feedback Loop of Hippo- and c-Jun-Amino-Terminal Kinase Signaling Pathways Regulates Amyloid-Beta-Mediated Neurodegeneration, Madison Irwin, Meghana Tare, Aditi Singh, Oorvashi Roy Puli, Neha Gogia, Matthew Riccetti, Prajakta Deshpande, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

An undergraduate cell biology laboratory exercise of Nile Red staining to mark lipid droplets in fly eye model of neurodegeneration, Prajakta Deshpande, Anuradha Venkatakrishnan Chimata, Amit Singh
Biology Faculty Publications

2019

GMR42H01, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR41H07, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR40C05, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR41C04, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR42E10, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR39H01, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR35A04, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR41F05, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR40C09, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR36A10, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR42A07, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR40E08, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

GMR36A08, Anuradha Venkatakrishnan Chimata, Oorvashi Roy Puli, Amit Singh
DVE Enhancer Sequences Utilized in GMR Line

PDF

48839 (GMR19B04), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

Comparative Transcriptomic Analysis and Structure Prediction of Novel Newt Proteins, Abijeet Singh Mehta, Agustin Luz-Madrigal, Jian-Liang Li, Panagiotis A. Tsonis, Amit Singh
Amit Singh

49283 (GMR19C03), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

Exploring the Efficacy of Natural Products in Alleviating Alzheimer’s Disease Using Animal Models, Prajakta Deshpande, Neha Gogia, Amit Singh
Amit Singh

An Undergraduate Cell Biology Lab: Western Blotting to Detect Proteins from Drosophila Eye, Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

45437 (GMR18B08), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

Characterization of a morphogenetic furrow specific Gal4 driver in the developing Drosophila eye, Ankita Sarkar, Neha Gogia, Kevin Farley, Lydia C. Payton, Amit Singh
Amit Singh

Cullin-4 Regulates Wingless and JNK Signaling-Mediated Cell Death in the Drosophila Eye., Meghana Tare, Ankita Sarkar, Shimpi Bedi, Madhuri Kango-Singh, Amit Singh
Amit Singh

48784 (GMR17G08), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

48770 (GMR17E04), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

45833 (GMR19D09), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

47472 (GMR16G02), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

45442 (GMR18D08), Neha Gogia, Ankita Sarkar, Amit Singh
Amit Singh

Hippo Signaling in Cancer: Lessons from Drosophila Models, Kirti Snigdha, Karishma Sanjay Gangwani, Gauri Vijay Lapalikar, Amit Singh, Madhuri Kango-Singh
Amit Singh

GMR41H07, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR41C04, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR42E10, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR42H01, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

Insights into Regeneration Tool Box: An Animal Approach, Abijeet Singh Mehta, Amit Singh
Amit Singh

GMR41F05, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR42A07, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR40C05, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR40C09, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR40E08, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR36A10, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR39H01, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR36A08, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

GMR35A04, Anuradha Chimata Venkatakrishnan, Oorvashi Roy Pula, Amit Singh
Amit Singh

Proximal Fate Marker Homothorax Marks the Lateral Extension of Stalk-Eyed Fly Cyrtodopsis whitei, Amit Singh, Neha Gogia, Chia-Yiu Chang, Yi Henry Sun
Amit Singh

Regeneration Data: RNA Sequences, Abijeet Singh Mehta, Amit Singh
Amit Singh

Real-Time Quantitative PCR to Demonstrate Gene Expression in an Undergraduate Lab, Abijeet Singh Mehta, Amit Singh
Amit Singh

Total RNA Extraction from Transgenic Flies Misexpressing Foreign Genes to Perform Next Generation RNA Sequencing, Abijeet Singh Mehta, Agustin Luz-Madrigal, Jian-Liang Li, Panagiotis A. Tsonis, Amit Singh
Amit Singh

Insights into Regeneration Tool Box: An Animal Approach, Abijeet Singh Mehta, Amit Singh
Biology Faculty Publications

Assessing the Efficacy of Seedling Planting as a Forest Restoration Technique in Temperate Hardwood Forests Impacted by Invasive Species, Michaela J. Woods, Meredith Cobb, Katie Hickle
Biology Faculty Publications

PDF

Comparative Transcriptomic Analysis and Structure Prediction of Novel Newt Proteins, Abijeet Singh Mehta, Agustin Luz-Madrigal, Jian-Liang Li, Panagiotis A. Tsonis, Amit Singh
Biology Faculty Publications

PDF

Total RNA Extraction from Transgenic Flies Misexpressing Foreign Genes to Perform Next Generation RNA Sequencing, Abijeet Singh Mehta, Agustin Luz-Madrigal, Jian-Liang Li, Panagiotis A. Tsonis, Amit Singh
Biology Faculty Publications

PDF

Emergence of Oxacillin Resistance in Stealth Methicillin-Resistant Staphylococcus aureus Due to mecA Sequence Instability, Richard V. Goering, Erin A. Swartzendriber, Anne E. Obradovich, Isabella A. Tickler, Fred C. Tenover
Biology Faculty Publications

PDF

Proximal Fate Marker Homothorax Marks the Lateral Extension of Stalk-Eyed Fly Cyrtodopsis whitei, Amit Singh, Neha Gogia, Chia-Yiu Chang, Yi Henry Sun
Biology Faculty Publications

Hippo Signaling in Cancer: Lessons from Drosophila Models, Kirti Snigdha, Karishma Sanjay Gangwani, Gauri Vijay Lapalikar, Amit Singh, Madhuri Kango-Singh
Biology Faculty Publications

PDF

Streptococcus agalactiae Strains with Chromosomal Deletions Evade Detection with Molecular Methods, Isabella A. Tickler, Fred C. Tenover, Scott Dewell, Victoria M. Le, Rachel N. Blackman, Richard V. Goering, Amy E. Rogers, Heather Piwonka, Brittney D. Jung-Hynes, Derrick J. Chen, Michael J. Loeffelholz, Devasena Gnanashanmugam, Ellen Jo Baron
Biology Faculty Publications

PDF

Diversity of resistance mechanisms in carbapenem-resistant Enterobacteriaceae at a health care system in Northern California, from 2013 to 2016, Fiona Senchyna, Rajiv L. Gaur, Johanna Sandlund, Cynthia Truong, Guillaume Tremintin, Dietmar Kültz, Carlos A. Gomez, Fiona B. Tamburini, Tessa Andermann, Ami Bhatt, Isabella A. Tickler, Nancy Watz, Indre Budvytiene, Gongyi Shi, Fred C. Tenover, Niaz Banaei
Biology Faculty Publications

PDF

Regeneration Data: RNA Sequences, Abijeet Singh Mehta, Amit Singh
Regeneration data

Exploring the Efficacy of Natural Products in Alleviating Alzheimer’s Disease Using Animal Models, Prajakta Deshpande, Neha Gogia, Amit Singh
Biology Faculty Publications

PDF

2018

Characterization of a morphogenetic furrow specific Gal4 driver in the developing Drosophila eye, Ankita Sarkar, Neha Gogia, Kevin Farley, Lydia C. Payton, Amit Singh
Biology Faculty Publications

PDF

Strain types of Staphylococcus aureus nasal isolates from persons undergoing joint replacement surgery, Fred C. Tenover, Kebert Eloi, Isabella A. Tickler, Susan Cohen, Gary B. Schneider, Steven C. Vlad
Biology Faculty Publications

Cullin-4 Regulates Wingless and JNK Signaling-Mediated Cell Death in the Drosophila Eye., Meghana Tare, Ankita Sarkar, Shimpi Bedi, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

Atypical PKCiota Contributes to Poor Prognosis Through Loss of Apical-basal Polarity and Cyclin E Overexpression in Ovarian Cancer, Astrid M. Eder, Xiaomei Sui, Daniel G. Rosen, Laura K. Nolden, Kwai Wa Cheng, John P. Lahad, Madhuri Kango-Singh, Karen H. Lu, Carla L. Warneke, Edward N. Atkinson, Isabelle Bedrosian, Khandan Keyomarsi, Wen-lin Kuo, Joe W. Gray, Jerry C. P. Yin, Jinsong Liu, Georg Halder, Gordon B. Mills
Madhuri Kango-Singh

PDF

Shar-pei Mediates Cell Proliferation Arrest During Imaginal Disc Growth in Drosophila, Madhuri Kango-Singh, Riitta Nolo, Chunyao Tao, Patrik Verstreken, P. Robin Hiesinger, Hugo J. Bellen, Georg Halder
Madhuri Kango-Singh

Intercellular Cooperation and Competition in Brain Cancers: Lessons From Drosophila and Human Studies, Indrayani Waghmare, Austin Roebke, Mutsuko Minata, Madhuri Kango-Singh, Ichiro Nakano
Madhuri Kango-Singh

Toxicity and Localization Studies of a Potential Photodynamic Therapy Agent in Drosophila, Joshua Yoho, Colette Stroh, Shawn Swavey, Madhuri Kango-Singh
Madhuri Kango-Singh

The Tumour-suppressor Genes NF2/Merlin and Expanded Act Through Hippo Signalling to Regulate Cell Proliferation and Apoptosis, Fisun Hamaratoglu, Maria Willecke, Madhuri Kango-Singh, Riitta Nolo, Hamed Jafar-Nejad, Georg Halder
Madhuri Kango-Singh

Loss of Cell Adhesion Increases Tumorigenic Potential of Polarity Deficient Scribble Mutant Cells, Indrayani Waghmare, Madhuri Kango-Singh
Madhuri Kango-Singh

Hippo Promotes Proliferation Arrest and Apoptosis in the Salvador/Warts Pathway, Ryan Udan, Madhuri Kango-Singh, Riitta Nolo, Chunyao Tao, Georg Halder
Madhuri Kango-Singh

Hippo Signalling Controls Dronc Activity to Regulate Organ Size in Drosophila, Shilpi Verghese, Shimpi Bedi, Madhuri Kango-Singh
Madhuri Kango-Singh

Drosophila as an Emerging Model to Study Metastasis, Madhuri Kango-Singh, Georg Halder
Madhuri Kango-Singh

FOXD1–ALDH1A3 Signaling Is a Determinant for the Self-Renewal and Tumorigenicity of Mesenchymal Glioma Stem Cells, Peng Cheng, Jia Wang, Indrayani Waghmare, Stefania Sartini, Vito Coviello, Zhuo Zhang, Sung-Hak Kim, Ahmed Mohyeldin, Marat S. Pavlyukov, Mutsuko Minata, Claudia L.L. Valentim, Rishi Raj Chhipa, Krishna P.L. Bhat, Biplab Dasgupta, Concettina La Motta, Madhuri Kango-Singh, Ichiro Nakano
Madhuri Kango-Singh

Generation and Staining of Intestinal Stem Cell Lineage in Adult Midgut, Shree Ram Singh, Manoj K. Mishra, Madhuri Kango-Singh, Steven X. Hou
Madhuri Kango-Singh

Genetic, Immunofluorescence Labeling, and In Situ Hybridization Techniques in Identification of Stem Cells in Male and Female Germline Niches, Shree Ram Singh, Ying Liu, Madhuri Kango-Singh, Eviatar Nevo
Madhuri Kango-Singh

Tumor Suppression by Cell Competition Through Regulation of the Hippo Pathway, Chiao-lin Chen, Molly C. Schroeder, Madhuri Kango-Singh, Chunyao Tao, Georg Halder
Madhuri Kango-Singh

Toxicity and Localization Studies of a Potential Photodynamic Therapy Agent in Drosophila, Joshua Yoho, Colette Stroh, Shawn Swavey, Madhuri Kango-Singh
Shawn M. Swavey

45833 (GMR19D09), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

48839 (GMR19B04), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

49283 (GMR19C03), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

48784 (GMR17G08), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

48770 (GMR17E04), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

47472 (GMR16G02), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

45437 (GMR18B08), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

45442 (GMR18D08), Neha Gogia, Ankita Sarkar, Amit Singh
Dpp Enhancer Sequences Utilized in GMR Line

PDF

Laboratory diagnosis of Clostridium difficile infection, Fred C. Tenover
Biology Faculty Publications

2017

The 'Pseudomonas aeruginosa' PSL Polysaccharide Is a Social but Noncheatable Trait in Biofilms, Yasuhiko Irie, Aled E. Roberts, Kasper N. Kragh, Vernita D. Gordon, Jaime B. Hutchison, Rosalind J. Allen, Gavin Melaugh, Thomas Bjarnsholt, Stuart A. West, Stephen P. Diggle
Biology Faculty Publications

PDF

Real-Time Quantitative PCR to Demonstrate Gene Expression in an Undergraduate Lab, Abijeet Singh Mehta, Amit Singh
Biology Faculty Publications

PDF

An Undergraduate Cell Biology Lab: Western Blotting to Detect Proteins from Drosophila Eye, Neha Gogia, Ankita Sarkar, Amit Singh
Biology Faculty Publications

PDF

Cyclic di-GMP-Responsive Transcriptional Reporter Bioassays in 'Pseudomonas aeruginosa', Bradley R. Borlee, Grace I. Borlee, Kevin H. Martin, Yasuhiko Irie
Biology Faculty Publications

2016

FOXD1–ALDH1A3 Signaling Is a Determinant for the Self-Renewal and Tumorigenicity of Mesenchymal Glioma Stem Cells, Peng Cheng, Jia Wang, Indrayani Waghmare, Stefania Sartini, Vito Coviello, Zhuo Zhang, Sung-Hak Kim, Ahmed Mohyeldin, Marat S. Pavlyukov, Mutsuko Minata, Claudia L.L. Valentim, Rishi Raj Chhipa, Krishna P.L. Bhat, Biplab Dasgupta, Concettina La Motta, Madhuri Kango-Singh, Ichiro Nakano
Biology Faculty Publications

Cullin-4 Regulates Wingless and JNK Signaling-Mediated Cell Death in the Drosophila Eye., Meghana Tare, Ankita Sarkar, Shimpi Bedi, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

Beyond Bivariate Correlations: Three-block Partial Least Squares Illustrated with Vegetation, Soil, and Topography, Daehyun Kim, Thomas J. DeWitt, César S. B. Costa, John A. Kupfer, Ryan W. McEwan, J. Anthony Stallins
Ryan McEwan

PDF

Eyeless Collaborates with Hedgehog and Decapentaplegic Signaling in Drosophila Eye Induction, Madhuri Kango-Singh, Amit Singh, Y. Henry Sun
Amit Singh

Dorso-Ventral Asymmetric Functions of teashirt in Drosophila Eye Development Depend on Spatial Cues Provided by Early DV Patterning Genes, Amit Singh, Madhuri Kango-Singh, Kwang-Wook Choi, Y. Henry Sun
Amit Singh

Drosophila TRAP230/240 are Essential Coactivators for Atonal in Retinal Neurogenesis, Janghoo Lim, Ok-Kyung Lee, Ya-Chieh Hsu, Amit Singh, Kwang-Wook Choi
Amit Singh

Drosophila C-Terminal Src Kinase Regulates Growth via the Hippo Signaling Pathway, Hailey J. Kwon, Indrayani Waghmare, Shilpi Verghese, Aditi Singh, Amit Singh, Madhuri Kango-Singh
Amit Singh

Annual Drosophila Research Conference, 2008, Madhuri Kango-Singh, Gerald B. Call, Amit Singh
Amit Singh

A Vertex Specific Dorsal Selector dve Represses the Ventral Appendage Identity in Drosophila Head, Naruto Kiritooshi, Takeshi Yorimitsu, Tetsuya Shirai, Oorvashi Roy Puli, Amit Singh, Hideki Nakagoshi
Amit Singh

Annual Drosophila Research Conference, 2006, Madhuri Kango-Singh, Amit Singh
Amit Singh

Annual Drosophila Research Conference, 2010, Gerald B. Call, Oorvashi Roy Puli, Shilpi Verghese, Amit Singh
Amit Singh

Focus on Molecules: Six3 – Master or Apprentice?, Amit Singh, Panagiotis A. Tsonis
Amit Singh

Opposing Interactions between Homothorax and Lobe define the Ventral Eye Margin of Drosophila Eye, Amit Singh, Meghana Tare, Madhuri Kango-Singh, Won-Seok Son, Kyung-Ok Cho, Kwang-Wook Choi
Amit Singh

Larval Legs of Mulberry Silkworm Bombyx mori are Prototypes for the Adult Legs, Amit Singh, Madhuri Kango-Singh, R. Parthasarathy, K. P. Gopinathan
Amit Singh

Search for Drosophila Genes based on Patterned Expression of Mini-White Reporter Gene of a P lacW Vector in Adult Eyes, Jyoti Bhojwani, Amit Singh, Leonie Misquitta, Arati Mishra, Pradip Sinha
Amit Singh

Polyalanine Expansion in HOXA13: Three New Affected Families and the Molecular Consequences in a Mouse Model, Jeffrey W. Innis, Douglas Mortlock, Zhi Chen, Michael Ludwig, Melissa E. Williams, Thomas M. Williams, Colleen D. Doyle, Zhihong Shao, Michael Glynn, Davor Mikulic, Katarina Lehmann, Stefan Mundlos, Boris Utsch
Thomas M. Williams

Evolutionary History of B1 Retroposons in the Genus Mus, David H. Kass, Melissa E. Raynor, Thomas M. Williams
Thomas M. Williams

Range of HOX/TALE Superclass Associations and Protein Domain Requirements for HOXA13:MEIS Interaction, Thomas M. Williams, Melissa E. Williams, Jeffrey W. Innis
Thomas M. Williams

Integrating Cancer Genomics and Proteomics in the Post-Genome Era, Samir Hanash, Miroslav P. Bobek, David S. Rickman, Thomas M. Williams, Jean Marie Rouillard, Rork Kuick, Eric Puravs
Thomas M. Williams

A HOXA13 Allele with a Missense Mutation in the Homeobox and a Dinucleotide Deletion in the Promoter Underlies Guttmacher Syndrome, Jeffrey W. Innis, Frances R. Goodman, Chiara Bacchelli, Thomas M. Williams, Douglas Mortlock, Praveen Sateesh, Peter J. Scambler, Wendy McKinnon, Alan E. Guttmacher
Thomas M. Williams

Translational Control of the Proteome: Relevance to Cancer, Kapil Dua, Thomas M. Williams, Laura Beretta
Thomas M. Williams

A Glimpse into Dorso-Ventral Patterning of the Drosophila Eye, Amit Singh, Meghana Tare, Oorvashi Roy Puli, Madhuri Kango-Singh
Amit Singh

Domain Specific Genetic Mosaic System in the Drosophila Eye, Meghana Tare, Oorvashi Roy Puli, Michael Moran, Madhuri Kango-Singh, Amit Singh
Amit Singh

Annual Drosophila Research Conference, 2011, Gerald B. Call, Shilpi Verghese, Oorvashi Roy Puli, Dawn M. Hemmerle, Madhuri Kango-Singh, Amit Singh
Amit Singh

Annual Drosophila Research Conference, 2012, Gerald B. Call, Oorvashi Roy Puli, Anna M. James, Christopher R. Pope, Madhuri Kango-Singh, Amit Singh
Amit Singh

Drosophila Adult Eye Model to Teach Scanning Electron Microscopy in an Undergraduate Cell Biology Laboratory, Meghana Tare, Oorvashi Roy Puli, Sarah M. Oros, Amit Singh
Amit Singh

PDF

A Cell Biology Laboratory Exercise to Study Sub-Cellular Organelles in Drosophila, Meghana Tare, Amit Singh
Amit Singh

PDF

Genetic Interaction of Lobe with its Modifiers in Dorsoventral Patterning and Growth of the Drosophila Eye, Amit Singh, Jeeder Chan, Joshua J. Chern, Kwang-Wook Choi
Amit Singh

Drosophila as a Model for Understanding Development and Disease, Amit Singh, Kenneth D. Irvine
Amit Singh

Protein Trap Lines of Drosophila to demonstrate Spatio-Temporal Localization of Proteins in an Undergraduate Lab, Oorvashi Roy Puli, Amit Singh
Amit Singh

PDF

Regulation of Organ Size: Insights from the Drosophila Hippo Signaling Pathway, Madhuri Kango-Singh, Amit Singh
Amit Singh

Loss of Cell Adhesion Increases Tumorigenic Potential of Polarity Deficient Scribble Mutant Cells, Indrayani Waghmare, Madhuri Kango-Singh
Biology Faculty Publications

PDF

Eyeless Collaborates with Hedgehog and Decapentaplegic Signaling in Drosophila Eye Induction, Madhuri Kango-Singh, Amit Singh, Y. Henry Sun
Madhuri Kango-Singh

Opposing Interactions between Homothorax and Lobe define the Ventral Eye Margin of Drosophila Eye, Amit Singh, Meghana Tare, Madhuri Kango-Singh, Won-Seok Son, Kyung-Ok Cho, Kwang-Wook Choi
Madhuri Kango-Singh

Larval Legs of Mulberry Silkworm Bombyx mori are Prototypes for the Adult Legs, Amit Singh, Madhuri Kango-Singh, R. Parthasarathy, K. P. Gopinathan
Madhuri Kango-Singh

Regulation of Organ Size: Insights from the Drosophila Hippo Signaling Pathway, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

Domain Specific Genetic Mosaic System in the Drosophila Eye, Meghana Tare, Oorvashi Roy Puli, Michael Moran, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

Drosophila C-Terminal Src Kinase Regulates Growth via the Hippo Signaling Pathway, Hailey J. Kwon, Indrayani Waghmare, Shilpi Verghese, Aditi Singh, Amit Singh, Madhuri Kango-Singh
Madhuri Kango-Singh

Dorso-Ventral Asymmetric Functions of teashirt in Drosophila Eye Development Depend on Spatial Cues Provided by Early DV Patterning Genes, Amit Singh, Madhuri Kango-Singh, Kwang-Wook Choi, Y. Henry Sun
Madhuri Kango-Singh

Annual Drosophila Research Conference, 2011, Gerald B. Call, Shilpi Verghese, Oorvashi Roy Puli, Dawn M. Hemmerle, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

Annual Drosophila Research Conference, 2008, Madhuri Kango-Singh, Gerald B. Call, Amit Singh
Madhuri Kango-Singh

Annual Drosophila Research Conference, 2012, Gerald B. Call, Oorvashi Roy Puli, Anna M. James, Christopher R. Pope, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

Annual Drosophila Research Conference, 2006, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

A Glimpse into Dorso-Ventral Patterning of the Drosophila Eye, Amit Singh, Meghana Tare, Oorvashi Roy Puli, Madhuri Kango-Singh
Madhuri Kango-Singh

A Survey of the Trans-regulatory Landscape for Drosophila Melanogaster Abdominal Pigmentation, William A. Rogers, Sumant Grover, Samantha J. Stringer, Jennifer Parks, Mark Rebeiz, Thomas M. Williams
Thomas M. Williams

Recurrent Modification of a Conserved Cis-Regulatory Element Underlies Fruit Fly Pigmentation Diversity, William A. Rogers, Joseph R. Salomone, David J. Tacy, Eric M. Camino, Kristen A. Davis, Mark Rebeiz, Thomas M. Williams
Thomas M. Williams

PDF

Genetic and Molecular Insights into the Development and Evolution of Sexual Dimorphism, Thomas M. Williams, Sean B. Carroll
Thomas M. Williams

Candidate Downstream Regulated Genes of HOX Group 13 Transcription Factors with and without Monomeric DNA Binding Capability, Thomas M. Williams, Melissa E. Williams, Rork Kuick, David Misek, Kevin McDonagh, Samir Hanash, Jeffrey W. Innis
Thomas M. Williams

Group 13 HOX Proteins Interact with the MH2 Domain of R-Smads and Modulate Smad Transcriptional Activation Functions Independent of HOX DNA Binding Capability, Thomas M. Williams, Melissa E. Williams, Joanne H. Heaton, Thomas D. Gelehrter, Jeffrey W. Innis
Thomas M. Williams

Quantitative Comparison of cis-Regulatory Element (CRE) Activities in Transgenic Drosophila melanogaster, William A. Rogers, Thomas M. Williams
Thomas M. Williams

PDF

The Regulation and Evolution of a Genetic Switch Controlling Sexually Dimorphic Traits in Drosophila, Thomas M. Williams, Jane E. Selegue, Thomas Werner, Nicolas Gompel, Artyom Kopp, Sean B. Carroll
Thomas M. Williams

The Evolution of Bab Paralog Expression and Abdominal Pigmentation among Sophophora Fruit Fly Species, Joseph R. Salomone, William A. Rogers, Mark Rebeiz, Thomas M. Williams
Thomas M. Williams

The Evolutionary Origination and Diversification of a Dimorphic Gene Regulatory Network through Parallel Innovations in cis and trans, Eric M. Camino, John C. Butts, Alison J. Ordway, Jordan E. Vellky, Mark Rebeiz, Thomas M. Williams
Thomas M. Williams

PDF

The Expansion of Body Coloration Involves Coordinated Evolution in cis and trans within the Pigmentation Regulatory Network of Drosophila prostipennis, Alison J. Ordway, Kerry N. Hancuch, Winslow C. Johnson, Thomas M. Williams, Mark Rebeiz
Thomas M. Williams

Repeated Morphological Evolution through cis-Regulatory Changes in a Pleiotropic Gene, Benjamin Prud'homme, Nicolas Gompel, Antonis Rokas, Victoria A. Kassner, Thomas M. Williams, Shu-Dan Yeh, John R. True, Sean B. Carroll
Thomas M. Williams

Rapid Evolution of Sex-Pheromone-producing Enzyme in Drosophila, Troy R. Shirangi, Héloïse D. Dufour, Thomas M. Williams, Sean B. Carroll
Thomas M. Williams

PDF

Experimental Approaches to Evaluate the Contributions of Candidate Cis-regulatory Mutations to Phenotypic Evolution, Mark Rebeiz, Thomas M. Williams
Thomas M. Williams

Generation of a Novel Wing Colour Pattern by the Wingless Morphogen, Thomas Werner, Shigeyuki Koshikawa, Thomas M. Williams, Sean B. Carroll
Thomas M. Williams

Alzheimer's Sisease: The Silver Tsunami of the 21st Century, Ankita Sarkar, Madison Irwin, Aditi Singh, Matthew Riccetti, Amit Singh
Amit Singh

Eye Suppression, A Novel Function of Teashirt, Requires Wingless Signaling, Amit Singh, Madhuri Kango-Singh, Y. Henry Sun
Amit Singh

PDF

Eye Development at the Houston "Fly Meeting", Amit Singh
Amit Singh

PDF

Cell Type-Specific Responses to Wingless, Hedgehog and Decapentaplegic Are Essential for Patterning Early Eye-Antenna Disc in Drosophila, Jong-Hoon Won, Orkhon Tsogtbartarr, Wonseok Son, Amit Singh, Kwang-Wook Choi, Kyung-Ok Cho
Amit Singh

PDF

Developmental Aspects of Mulberry and Nonmulberry Silkworm Species: A Comparative Study, K. P. Gopinathan, Omana Joy, Amit Singh
Amit Singh

Initial State of the Drosophila Eye before Dorsoventral Specification is Equivalent to Ventral, Amit Singh, Kwang-Wook Choi
Amit Singh

PDF

Neurodegeneration - A Means to an End, Amit Singh
Amit Singh

PDF

The Hippo Pathway Effector Yki Downregulates Wg Signaling to promote Retinal Differentiation in the Drosophila Eye, Erika Lynn Wittkorn, Ankita Sarkar, Kristine Garcia, Madhuri Kango-Singh, Amit Singh
Amit Singh

PDF

Molecular Genetic Mechanisms of Axial Patterning: Mechanistic Insights into Generation of Axes in the Developing Eye, Meghana Tare, Oorvashi Roy Puli, Amit Singh
Amit Singh

Lobe and Serrate are Required for Cell Survival during Early Eye Development in Drosophila, Amit Singh, Xiao Shi, Kwang-Wook Choi
Amit Singh

PDF

Patterning Defects in Silkworm Embryos Analysed through Cuticle Preparations, Amit Singh, Madhuri Kango-Singh, K. P. Gopinathan
Amit Singh

Eye Suppression, A Novel Function of Teashirt, Requires Wingless Signaling, Amit Singh, Madhuri Kango-Singh, Y. Henry Sun
Madhuri Kango-Singh

PDF

The Hippo Pathway Effector Yki Downregulates Wg Signaling to promote Retinal Differentiation in the Drosophila Eye, Erika Lynn Wittkorn, Ankita Sarkar, Kristine Garcia, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

Patterning Defects in Silkworm Embryos Analysed through Cuticle Preparations, Amit Singh, Madhuri Kango-Singh, K. P. Gopinathan
Madhuri Kango-Singh

PDF

Alzheimer's Disease: The Silver Tsunami of the 21st Century, Ankita Sarkar, Madison Irwin, Aditi Singh, Matthew Riccetti, Amit Singh
Biology Faculty Publications

PDF

Design of a Factorial Experiment with Randomization Restrictions to Assess Medical Device Performance on Vascular Tissue, Wiebke Diestelkamp, Carissa M. Krane, Margaret Pinnell
Carissa M. Krane

PDF

Dynamic Regulation of Aquaglyceroporin Expression in Erythrocyte Cultures from Cold- and Warm-Acclimated Cope's Gray Treefrog, Hyla Chrysoscelis, Venkateshwar Mutyam, Matthew V. Puccetti, James Frisbie, David L. Goldstein, Carissa M. Krane
Carissa Krane

A Molecular Screening Method for Unisexual Ambystoma using Mitochondrial DNA, Elizabeth A. Rhoads, Carissa M. Krane, P. Kelly Williams
Carissa Krane

Comparative Functional Analysis of Aquaporins/Glyceroporins in Mammals and Anurans, Carissa M. Krane, David L. Goldstein
Carissa Krane

Mechanical Test Methods for Assessing Porcine Carotid and Uterine Artery Burst Pressure Following Ex Vivo Ultrasonic Ligature Seal and Transection, Carissa M. Krane, Margaret Pinnell, Courtney Gardner, Mercedes Thompson, James Coleman, Robert Wilkens
Carissa Krane

Endo-Porter–Mediated Delivery of Phosphorodiamidate Morpholino Oligos (PMOs) in Erythrocyte Suspension Cultures from Cope's Gray Treefrog Hyla Chrysoscelis, Venkateshwar Mutyam, Matthew V. Puccetti, James Frisbie, David L. Goldstein, Carissa M. Krane
Carissa Krane

Empirical Analysis of the STR Profiles Resulting from Conceptual Mixtures, David R. Paoletti, Travis E. Doom, Carissa M. Krane, Michael L. Raymer, Dan E. Krane
Carissa Krane

Functional Requirement of Aquaporin-5 in Plasma Membranes of Sweat Glands, Lene N. Nejsum, Tae-Hwan Kwon, Uffe B. Jensen, Ornella Fumagalli, Jørgen Frøkiaer, Carissa M. Krane, Anil G. Menon, Landon S. King, Peter C. Agre, Søren Nielsen
Carissa Krane

Excretion and Conservation of Glycerol, and Expression of Aquaporins and Glyceroporins, During Cold Acclimation in Cope's Gray Tree Frog Hyla Chrysoscelis, Sarah L. Zimmerman, James Frisbie, David L. Goldstein, Jennifer West, Kevin Rivera, Carissa M. Krane
Carissa Krane

Salivary Acinar Cells from Aquaporin 5-deficient Mice Have Decreased Membrane Water Permeability and Altered Cell Volume Regulation, Carissa M. Krane, James E. Melvin, Ha-Van Nguyen, Linda Richardson, Jennifer E. Towne, Thomas Doetschman, Anil G. Menon
Carissa Krane

Mechanical Test Methods for Assessing Porcine Carotid and Uterine Artery Burst Pressure Following Ex Vivo Ultrasonic Ligature Seal and Transection, Carissa M. Krane, Margaret Pinnell, Courtney Gardner, Mercedes Thompson, James Coleman, Robert Wilkens
Margaret Pinnell

Design of a Factorial Experiment with Randomization Restrictions to Assess Medical Device Performance on Vascular Tissue, Wiebke Diestelkamp, Carissa M. Krane, Margaret Pinnell
Margaret Pinnell

Role of Multicellular Aggregates in Biofilm Formation, Kasper N. Kragh, Jaime B. Hutchison, Gavin Melaugh, Chris Rodesney, Aled E. L. Roberts, Yasuhiko Irie, Peter Ø. Jensen, Stephen P. Diggle, Rosalind J. Allen, Vernita Gordon, Thomas Bjarnsholt
Biology Faculty Publications

PDF

The Impact of Oxygen on Bacterial Enteric Pathogens, Nathan Wallace, Ashley N. Zani, Elizabeth A. Abrams, Yvonne Sun
Biology Faculty Publications

PDF

2015

Precision-Engineering the Pseudomonas aeruginosa Genome with Two-Step Allelic Exchange, Laura R. Hmelo, Bradley R. Borlee, Henrik Almblad, Michelle E. Love, Trevor E. Randall, Boo Shan Tseng, Chuyang Lin, Yasuhiko Irie, Kelly M. Storek, Jaeun Jane Yang, Richard J. Siehnel, P. Lynne Howell, Pradeep K. Singh, Tim Tolker-Nielsen, Matthew R. Parsek, Herbert P. Schweizer, Joe J. Harrison
Biology Faculty Publications

The cabABC Operon Essential for Biofilm and Rugose Colony Development in Vibrio vulnificus, Jin Hwan Park, Youmi Jo, Song Yee Jang, Haenaem Kwon, Yasuhiko Irie, Matthew R. Parsek, Myung Hee Kim, Sang Ho Choi
Biology Faculty Publications

PDF

Drosophila Eye Model to Study Neuroprotective Role of CREB Binding Protein (CBP) in Alzheimer’s Disease, Timothy Cutler, Ankita Sarkar, Michael Moran, Andrew Steffensmeier, Oorvashi Roy Puli, Greg Mancini, Meghana Tare
Biology Faculty Publications

PDF

Beyond Bivariate Correlations: Three-block Partial Least Squares Illustrated with Vegetation, Soil, and Topography, Daehyun Kim, Thomas J. DeWitt, César S. B. Costa, John A. Kupfer, Ryan W. McEwan, J. Anthony Stallins
Biology Faculty Publications

PDF

Homeotic Gene Teashirt (tsh) Has a Neuroprotective Function in Amyloid-Beta 42 Mediated Neurodegeneration, Michael T. Moran, Meghana Tare, Madhuri Kango-Singh, Amit Singh
Amit Singh

PDF

The Wings of Bombyx mori Develop from Larval Discs Exhibiting an Early Differentiated State: A Preliminary Report, Madhuri Kango-Singh, Amit Singh, K. P. Gopinathan
Amit Singh

PDF

An Improved Method for Chemical Devitellinization of X-gal Stained Drosophila Embryos, Amit Singh, Madhuri Kango-Singh, P. Sinha
Amit Singh

PDF

Dorsal Eye Selector Pannier (pnr) Suppresses the Eye Fate to Define Dorsal Margin of the Drosophila Eye, Sarah M. Oros, Meghana Tare, Madhuri Kango-Singh, Amit Singh
Amit Singh

PDF

Dorsoventral Boundary for Organizing Growth and Planar Polarity in the Drosophila Eye, Amit Singh, Janghoo Lim, Kwang-Wook Choi
Amit Singh

Enhancer Trap Technique: A Novel Tool for Identification and Developmental Characterization of Genes of Drosophila, Amit Singh
Amit Singh

PDF

The Fat Cadherin Acts through the Hippo Tumor-Suppressor Pathway to Regulate Tissue Size, Maria Willecke, Fisun Hamaratoglu, Madhuri Kango-Singh, Ryan Udan, Chiao-lin Chen, Chunyao Tao, Xinwei Zhang, Georg Halder
Madhuri Kango-Singh

PDF

Scribble Acts in the Drosophila Fat-Hippo Pathway to Regulate Warts Activity, Shilpi Verghese, Indrayani Waghmare, Hailey Kwon, Katelin Hanes, Madhuri Kango-Singh
Madhuri Kango-Singh

PDF

Homeotic Gene Teashirt (tsh) Has a Neuroprotective Function in Amyloid-Beta 42 Mediated Neurodegeneration, Michael T. Moran, Meghana Tare, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

PDF

The Wings of Bombyx mori Develop from Larval Discs Exhibiting an Early Differentiated State: A Preliminary Report, Madhuri Kango-Singh, Amit Singh, K. P. Gopinathan
Madhuri Kango-Singh

PDF

An Improved Method for Chemical Devitellinization of X-gal Stained Drosophila Embryos, Amit Singh, Madhuri Kango-Singh, P. Sinha
Madhuri Kango-Singh

PDF

Dorsal Eye Selector Pannier (pnr) Suppresses the Eye Fate to Define Dorsal Margin of the Drosophila Eye, Sarah M. Oros, Meghana Tare, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

PDF

Activation of JNK Signaling Mediates Amyloid-ß- Dependent Cell Death, Meghana Tare, Rohan Modi, Jaison Nainaparampil, Oorvashi Roy Puli, Shimpi Bedi, Pedro Fernandez-Funez, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

PDF

Novel Neuroprotective Function of Apical-Basal Polarity GeneCrumbs in Amyloid Beta 42 (Aβ42) Mediated Neurodegeneration, Andrew Steffensmeier, Meghana Tare, Oorvashi Roy Puli, Rohan Modi, Jaison Nainaparampil, Madhuri Kango-Singh, Amit Singh
Madhuri Kango-Singh

PDF

Activation of JNK Signaling Mediates Amyloid-ß- Dependent Cell Death, Meghana Tare, Rohan Modi, Jaison Nainaparampil, Oorvashi Roy Puli, Shimpi Bedi, Pedro Fernandez-Funez, Madhuri Kango-Singh, Amit Singh
Amit Singh

PDF

Novel Neuroprotective Function of Apical-Basal Polarity GeneCrumbs in Amyloid Beta 42 (Aβ42) Mediated Neurodegeneration, Andrew Steffensmeier, Meghana Tare, Oorvashi Roy Puli, Rohan Modi, Jaison Nainaparampil, Madhuri Kango-Singh, Amit Singh
Amit Singh

PDF

Genetic Changes to a Transcriptional Silencer Element Confers Phenotypic Diversity within and between Drosophila Species, Winslow C. Johnson, Alison J. Ordway, Masayoshi Watada, Jonathan N. Pruitt, Thomas M. Williams, Mark Rebeiz
Biology Faculty Publications

PDF

The Hippo Pathway Effector Yki Downregulates Wg Signaling to promote Retinal Differentiation in the Drosophila Eye, Erika Lynn Wittkorn, Ankita Sarkar, Kristine Garcia, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

Cell Type-Specific Responses to Wingless, Hedgehog and Decapentaplegic Are Essential for Patterning Early Eye-Antenna Disc in Drosophila, Jong-Hoon Won, Orkhon Tsogtbartarr, Wonseok Son, Amit Singh, Kwang-Wook Choi, Kyung-Ok Cho
Biology Faculty Publications

PDF

The Evolutionary Origination and Diversification of a Dimorphic Gene Regulatory Network through Parallel Innovations in cis and trans, Eric M. Camino, John C. Butts, Alison J. Ordway, Jordan E. Vellky, Mark Rebeiz, Thomas M. Williams
Biology Faculty Publications

PDF

Drosophila C-Terminal Src Kinase Regulates Growth via the Hippo Signaling Pathway, Hailey J. Kwon, Indrayani Waghmare, Shilpi Verghese, Aditi Singh, Amit Singh, Madhuri Kango-Singh
Biology Faculty Publications

2014

Intercellular Cooperation and Competition in Brain Cancers: Lessons From Drosophila and Human Studies, Indrayani Waghmare, Austin Roebke, Mutsuko Minata, Madhuri Kango-Singh, Ichiro Nakano
Biology Faculty Publications

PDF

A Vertex Specific Dorsal Selector dve Represses the Ventral Appendage Identity in Drosophila Head, Naruto Kiritooshi, Takeshi Yorimitsu, Tetsuya Shirai, Oorvashi Roy Puli, Amit Singh, Hideki Nakagoshi
Biology Faculty Publications

The Expansion of Body Coloration Involves Coordinated Evolution in cis and trans within the Pigmentation Regulatory Network of Drosophila prostipennis, Alison J. Ordway, Kerry N. Hancuch, Winslow C. Johnson, Thomas M. Williams, Mark Rebeiz
Biology Faculty Publications

Single-Cell Control of Initial Spatial Structure in Biofilm Development Using Laser Trapping, Jaime B. Hutchison, Chris Rodesney, Karishma S. Kaushik, Henry H. Le, Daniel A. Hurwitz, Yasuhiko Irie, Vernita Gordon
Biology Faculty Publications

ChIP-Seq and RNA-Seq Reveal an AmrZ-Mediated Mechanism for Cyclic di-GMP Synthesis and Biofilm Development by Pseudomonas aeruginosa, Christopher J. Jones, David Newsom, Benjamin Kelly, Yasuhiko Irie, Laura K. Jennings, Binjie Xu, Dominique H. Limoli, Joe J. Harrison, Matthew R. Parsek, Peter White, Daniel J. Wozniak
Biology Faculty Publications

PDF

LC/MS/MS-Based Quantitative Assay for the Secondary Messenger Molecule, c-di-GMP, Yasuhiko Irie, Matthew R. Parsek
Biology Faculty Publications

Toxicity and Localization Studies of a Potential Photodynamic Therapy Agent in Drosophila, Joshua Yoho, Colette Stroh, Shawn Swavey, Madhuri Kango-Singh
Biology Faculty Publications

A Survey of the Trans-regulatory Landscape for Drosophila Melanogaster Abdominal Pigmentation, William A. Rogers, Sumant Grover, Samantha J. Stringer, Jennifer Parks, Mark Rebeiz, Thomas M. Williams
Biology Faculty Publications

2013

The Evolution of Bab Paralog Expression and Abdominal Pigmentation among Sophophora Fruit Fly Species, Joseph R. Salomone, William A. Rogers, Mark Rebeiz, Thomas M. Williams
Biology Faculty Publications

Novel Neuroprotective Function of Apical-Basal Polarity GeneCrumbs in Amyloid Beta 42 (Aβ42) Mediated Neurodegeneration, Andrew Steffensmeier, Meghana Tare, Oorvashi Roy Puli, Rohan Modi, Jaison Nainaparampil, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

Homeotic Gene Teashirt (tsh) Has a Neuroprotective Function in Amyloid-Beta 42 Mediated Neurodegeneration, Michael T. Moran, Meghana Tare, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

Homeotic gene teashirt (tsh) has a neuroprotective function in amyloid-beta 42 mediated neurodegeneration., Michael M. Moran, Madhuri Kango-Singh, Amit Singh
Amit Singh

Recurrent Modification of a Conserved Cis-Regulatory Element Underlies Fruit Fly Pigmentation Diversity, William A. Rogers, Joseph R. Salomone, David J. Tacy, Eric M. Camino, Kristen A. Davis, Mark Rebeiz, Thomas M. Williams
Biology Faculty Publications

PDF

Genetic, Immunofluorescence Labeling, and In Situ Hybridization Techniques in Identification of Stem Cells in Male and Female Germline Niches, Shree Ram Singh, Ying Liu, Madhuri Kango-Singh, Eviatar Nevo
Biology Faculty Publications

Domain Specific Genetic Mosaic System in the Drosophila Eye, Meghana Tare, Oorvashi Roy Puli, Michael Moran, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

Molecular Genetic Mechanisms of Axial Patterning: Mechanistic Insights into Generation of Axes in the Developing Eye, Meghana Tare, Oorvashi Roy Puli, Amit Singh
Biology Faculty Publications

2012

Self-Produced Exopolysaccharide is a Signal that Stimulates Biofilm Formation in Pseudomonas aeruginosa, Yasuhiko Irie, Bradley R. Borlee, Jennifer R. O’Connor, Preston J. Hill, Caroline S. Harwood, Daniel J. Wozniak, Matthew R. Parsek
Biology Faculty Publications

Scribble Acts in the Drosophila Fat-Hippo Pathway to Regulate Warts Activity, Shilpi Verghese, Indrayani Waghmare, Hailey Kwon, Katelin Hanes, Madhuri Kango-Singh
Biology Faculty Publications

PDF

Hippo Signalling Controls Dronc Activity to Regulate Organ Size in Drosophila, Shilpi Verghese, Shimpi Bedi, Madhuri Kango-Singh
Biology Faculty Publications

The Pel and Psl Polysaccharides provide Pseudomonas aeruginosa Structural Redundancy within the Biofilm Matrix, Kelly M. Colvin, Yasuhiko Irie, Catherine S. Tart, Rodolfo Urbano, John C. Whitney, Cynthia Ryder, P. Lynne Howell, Daniel J. Wozniak, Matthew R. Parsek
Biology Faculty Publications

Annual Drosophila Research Conference, 2012, Gerald B. Call, Oorvashi Roy Puli, Anna M. James, Christopher R. Pope, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

Fluorescence-Based Reporter for Gauging Cyclic Di-GMP Levels in Pseudomonas aeruginosa, Morten T. Rybtke, Bradley R. Borlee, Keiji Murakami, Yasuhiko Irie, Morten Hentzer, Thomas E. Nielsen, Michael Givskov, Matthew R. Parsek, Tim Tolker-Nielsen
Biology Faculty Publications

PDF

Neurodegeneration - A Means to an End, Amit Singh
Biology Faculty Publications

PDF

Generation and Staining of Intestinal Stem Cell Lineage in Adult Midgut, Shree Ram Singh, Manoj K. Mishra, Madhuri Kango-Singh, Steven X. Hou
Biology Faculty Publications

Drosophila as a Model for Understanding Development and Disease, Amit Singh, Kenneth D. Irvine
Biology Faculty Publications

A Glimpse into Dorso-Ventral Patterning of the Drosophila Eye, Amit Singh, Meghana Tare, Oorvashi Roy Puli, Madhuri Kango-Singh
Biology Faculty Publications

Tumor Suppression by Cell Competition Through Regulation of the Hippo Pathway, Chiao-lin Chen, Molly C. Schroeder, Madhuri Kango-Singh, Chunyao Tao, Georg Halder
Biology Faculty Publications

PDF

2011

Protein Trap Lines of Drosophila to demonstrate Spatio-Temporal Localization of Proteins in an Undergraduate Lab, Oorvashi Roy Puli, Amit Singh
Biology Faculty Publications

PDF

Quantitative Comparison of cis-Regulatory Element (CRE) Activities in Transgenic Drosophila melanogaster, William A. Rogers, Thomas M. Williams
Biology Faculty Publications

PDF

Opposing Interactions between Homothorax and Lobe define the Ventral Eye Margin of Drosophila Eye, Amit Singh, Meghana Tare, Madhuri Kango-Singh, Won-Seok Son, Kyung-Ok Cho, Kwang-Wook Choi
Biology Faculty Publications

Activation of JNK Signaling Mediates Amyloid-ß- Dependent Cell Death, Meghana Tare, Rohan Modi, Jaison Nainaparampil, Oorvashi Roy Puli, Shimpi Bedi, Pedro Fernandez-Funez, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

Annual Drosophila Research Conference, 2011, Gerald B. Call, Shilpi Verghese, Oorvashi Roy Puli, Dawn M. Hemmerle, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

Dynamic Regulation of Aquaglyceroporin Expression in Erythrocyte Cultures from Cold- and Warm-Acclimated Cope's Gray Treefrog, Hyla Chrysoscelis, Venkateshwar Mutyam, Matthew V. Puccetti, James Frisbie, David L. Goldstein, Carissa M. Krane
Biology Faculty Publications

Mechanical Test Methods for Assessing Porcine Carotid and Uterine Artery Burst Pressure Following Ex Vivo Ultrasonic Ligature Seal and Transection, Carissa M. Krane, Margaret Pinnell, Courtney Gardner, Mercedes Thompson, James Coleman, Robert Wilkens
Biology Faculty Publications

PDF

Design of a Factorial Experiment with Randomization Restrictions to Assess Medical Device Performance on Vascular Tissue, Wiebke Diestelkamp, Carissa M. Krane, Margaret Pinnell
Biology Faculty Publications

PDF

Endo-Porter–Mediated Delivery of Phosphorodiamidate Morpholino Oligos (PMOs) in Erythrocyte Suspension Cultures from Cope's Gray Treefrog Hyla Chrysoscelis, Venkateshwar Mutyam, Matthew V. Puccetti, James Frisbie, David L. Goldstein, Carissa M. Krane
Biology Faculty Publications

PDF

Experimental Approaches to Evaluate the Contributions of Candidate Cis-regulatory Mutations to Phenotypic Evolution, Mark Rebeiz, Thomas M. Williams
Biology Faculty Publications

2010

Annual Drosophila Research Conference, 2010, Gerald B. Call, Oorvashi Roy Puli, Shilpi Verghese, Amit Singh
Biology Faculty Publications

Glycerol Uptake by Erythrocytes from Warm- and Cold-Acclimated Cope’s Gray Treefrogs, David L. Goldstein, James Frisbie, Andrew Diller, Ram Naresh Pandey, Carissa M. Krane
Biology Faculty Publications

Pseudomonas aeruginosa Biofilm Matrix Polysaccharide Psl is Regulated Transcriptionally by RpoS and Post-Transcriptionally by RsmA, Yasuhiko Irie, Melissa Starkey, Adrianne N. Edwards, Daniel J. Wozniak, Tony Romeo, Matthew R. Parsek
Biology Faculty Publications

Different Methods for Culturing Biofilms In Vitro, S. Brook Peterson, Yasuhiko Irie, Bradley R. Borlee, Keiji Murakami, Joe J. Harrison, Kelly M. Colvin, Matthew R. Parsek
Biology Faculty Publications

Dorsal Eye Selector Pannier (pnr) Suppresses the Eye Fate to Define Dorsal Margin of the Drosophila Eye, Sarah M. Oros, Meghana Tare, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

PDF

A Molecular Screening Method for Unisexual Ambystoma using Mitochondrial DNA, Elizabeth A. Rhoads, Carissa M. Krane, P. Kelly Williams
Biology Faculty Publications

Focus on Molecules: Six3 – Master or Apprentice?, Amit Singh, Panagiotis A. Tsonis
Biology Faculty Publications

Generation of a Novel Wing Colour Pattern by the Wingless Morphogen, Thomas Werner, Shigeyuki Koshikawa, Thomas M. Williams, Sean B. Carroll
Biology Faculty Publications

2009

Drosophila Adult Eye Model to Teach Scanning Electron Microscopy in an Undergraduate Cell Biology Laboratory, Meghana Tare, Oorvashi Roy Puli, Sarah M. Oros, Amit Singh
Biology Faculty Publications

PDF

Genetic and Molecular Insights into the Development and Evolution of Sexual Dimorphism, Thomas M. Williams, Sean B. Carroll
Biology Faculty Publications

Rapid Evolution of Sex-Pheromone-producing Enzyme in Drosophila, Troy R. Shirangi, Héloïse D. Dufour, Thomas M. Williams, Sean B. Carroll
Biology Faculty Publications

PDF

Regulation of Organ Size: Insights from the Drosophila Hippo Signaling Pathway, Madhuri Kango-Singh, Amit Singh
Biology Faculty Publications

Altered Regulation of Aquaporin Gene Expression in Allergen and IL-13-Induced Mouse Models of Asthma, Carissa M. Krane, Bijia Deng, Venkateshwar Mutyam, Casey A. McDonald, Stephen Pazdziorko, Lawrence Mason, Samuel Goldman, Marion Kasaian, Divya Chaudhary, Cara Williams, Melisa W.Y. Ho
Biology Faculty Publications

PDF

Patterning Defects in Silkworm Embryos Analysed through Cuticle Preparations, Amit Singh, Madhuri Kango-Singh, K. P. Gopinathan
Biology Faculty Publications

PDF

2008

A Cell Biology Laboratory Exercise to Study Sub-Cellular Organelles in Drosophila, Meghana Tare, Amit Singh
Biology Faculty Publications

PDF

Annual Drosophila Research Conference, 2008, Madhuri Kango-Singh, Gerald B. Call, Amit Singh
Biology Faculty Publications

The Regulation and Evolution of a Genetic Switch Controlling Sexually Dimorphic Traits in Drosophila, Thomas M. Williams, Jane E. Selegue, Thomas Werner, Nicolas Gompel, Artyom Kopp, Sean B. Carroll
Biology Faculty Publications

Quorum Sensing and Microbial Biofilms, Yasuhiko Irie, Matthew R. Parsek
Biology Faculty Publications

2007

In vivo Colonization Profile Study of Bordetella bronchiseptica in the Nasal Cavity, Yasuhiko Irie, Ming H. Yuk
Biology Faculty Publications

Drosophila TRAP230/240 are Essential Coactivators for Atonal in Retinal Neurogenesis, Janghoo Lim, Ok-Kyung Lee, Ya-Chieh Hsu, Amit Singh, Kwang-Wook Choi
Biology Faculty Publications